IL_9QQB_101

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CGAA*UG

Length

6 nucleotides

Bulged bases

9QQB|1|B5|G|119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QQB_101 not in the Motif Atlas

Geometric match to IL_6XJQ_007

Geometric discrepancy: 0.2653

The information below is about IL_6XJQ_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36175.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

6

Unit IDs

9QQB|1|B5|C|118
9QQB|1|B5|G|119
9QQB|1|B5|A|120
9QQB|1|B5|A|121
*
9QQB|1|B5|U|152
9QQB|1|B5|G|153

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BG

60S ribosomal protein L7a

Chain BN

Ribosomal protein L15

Chain Bh

60S ribosomal protein L35