IL_9QQB_131

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

AAGG*CAGCAGCAGCU

Length

15 nucleotides

Bulged bases

9QQB|1|B5|A|831, 9QQB|1|B5|A|834, 9QQB|1|B5|C|836

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQB|1|B5|A|726
9QQB|1|B5|A|727
9QQB|1|B5|G|728
9QQB|1|B5|G|729
*
9QQB|1|B5|C|827
9QQB|1|B5|A|828
9QQB|1|B5|G|829
9QQB|1|B5|C|830
9QQB|1|B5|A|831
9QQB|1|B5|G|832
9QQB|1|B5|C|833
9QQB|1|B5|A|834
9QQB|1|B5|G|835
9QQB|1|B5|C|836
9QQB|1|B5|U|837

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

Large ribosomal subunit protein uL4

Chain BM

60S ribosomal protein L14

Chain BS

Large ribosomal subunit protein eL20