IL_9QQB_169

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CGC*GG

Length

5 nucleotides

Bulged bases

9QQB|1|B5|G|1754

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QQB_169 not in the Motif Atlas

Geometric match to IL_8CRE_048

Geometric discrepancy: 0.2157

The information below is about IL_8CRE_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

9QQB|1|B5|C|1753
9QQB|1|B5|G|1754
9QQB|1|B5|C|1755
*
9QQB|1|B5|G|1762
9QQB|1|B5|G|1763

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BD

Large ribosomal subunit protein uL18

Chain BT

60S ribosomal protein L21

Chain Bb

60S ribosomal protein L29