IL_9QQB_183
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- GAG*CC
- Length
- 5 nucleotides
- Bulged bases
- 9QQB|1|B5|A|2143
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_183 not in the Motif Atlas
- Geometric match to IL_3OXE_001
- Geometric discrepancy: 0.3338
- The information below is about IL_3OXE_001
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
9QQB|1|B5|G|2142
9QQB|1|B5|A|2143
9QQB|1|B5|G|2144
*
9QQB|1|B5|C|2177
9QQB|1|B5|C|2178
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- Large ribosomal subunit protein uL4
- Chain Be
- Ribosomal protein L32
- Chain Br
- [histone H4]-N-methyl-L-lysine20 N-methyltransferase KMT5B
Coloring options: