IL_9QQB_188
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- (OMU)GAAC*GAA
- Length
- 8 nucleotides
- Bulged bases
- 9QQB|1|B5|A|2271
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_188 not in the Motif Atlas
- Geometric match to IL_7A0S_047
- Geometric discrepancy: 0.239
- The information below is about IL_7A0S_047
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_06671.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
9QQB|1|B5|OMU|2258
9QQB|1|B5|G|2259
9QQB|1|B5|A|2260
9QQB|1|B5|A|2261
9QQB|1|B5|C|2262
*
9QQB|1|B5|G|2270
9QQB|1|B5|A|2271
9QQB|1|B5|A|2272
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BP
- Large ribosomal subunit protein uL22
- Chain BR
- Ribosomal protein L19
- Chain Bl
- 60S ribosomal protein L39-like
- Chain Nu
- Isoform 2 of Transcription factor BTF3
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