IL_9QQB_194

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

AGAAG*CCCUUGAAAAU

Length

16 nucleotides

Bulged bases

9QQB|1|B5|C|2582, 9QQB|1|B5|U|2583

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQB|1|B5|A|2441
9QQB|1|B5|G|2442
9QQB|1|B5|A|2443
9QQB|1|B5|A|2444
9QQB|1|B5|G|2445
*
9QQB|1|B5|C|2580
9QQB|1|B5|C|2581
9QQB|1|B5|C|2582
9QQB|1|B5|U|2583
9QQB|1|B5|U|2584
9QQB|1|B5|G|2585
9QQB|1|B5|A|2586
9QQB|1|B5|A|2587
9QQB|1|B5|A|2588
9QQB|1|B5|A|2589
9QQB|1|B5|U|2590

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BA

Large ribosomal subunit protein uL2

Chain Bg

60S ribosomal protein L34

Chain Bp

60S ribosomal protein L37a