IL_9QQB_198

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CGC*GG

Length

5 nucleotides

Bulged bases

9QQB|1|B5|G|2495

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QQB_198 not in the Motif Atlas

Geometric match to IL_6TFF_002

Geometric discrepancy: 0.2149

The information below is about IL_6TFF_002

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

9QQB|1|B5|C|2494
9QQB|1|B5|G|2495
9QQB|1|B5|C|2496
*
9QQB|1|B5|G|2524
9QQB|1|B5|G|2525

Current chains

Chain B5

28S rRNA

Nearby chains

Chain Bg

60S ribosomal protein L34

Chain Bp

60S ribosomal protein L37a