IL_9QQB_207

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GG*CGAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QQB_207 not in the Motif Atlas

Geometric match to IL_8P9A_309

Geometric discrepancy: 0.2791

The information below is about IL_8P9A_309

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_73355.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

9QQB|1|B5|G|2739
9QQB|1|B5|G|2740
*
9QQB|1|B5|C|3334
9QQB|1|B5|G|3335
9QQB|1|B5|A|3336
9QQB|1|B5|C|3337

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BR

Ribosomal protein L19