IL_9QQB_213
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- GAAUG*CGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QQB_213 not in the Motif Atlas
- Homologous match to IL_8GLP_120
- Geometric discrepancy: 0.0996
- The information below is about IL_8GLP_120
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_67721.1
- Basepair signature
- cWW-tSW-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9QQB|1|B5|G|3442
9QQB|1|B5|A|3443
9QQB|1|B5|A|3444
9QQB|1|B5|U|3445
9QQB|1|B5|G|3446
*
9QQB|1|B5|C|3471
9QQB|1|B5|G|3472
9QQB|1|B5|C|3473
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain A2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Aa
- 40S ribosomal protein S3a
- Chain BA
- Large ribosomal subunit protein uL2
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