IL_9QQB_218

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GAA*UACC

Length

7 nucleotides

Bulged bases

9QQB|1|B5|A|3633, 9QQB|1|B5|C|4306

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QQB_218 not in the Motif Atlas

Geometric match to IL_8CRE_097

Geometric discrepancy: 0.1291

The information below is about IL_8CRE_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83389.2

Basepair signature

cWW-cWW

Number of instances in this motif group

5

Unit IDs

9QQB|1|B5|G|3632
9QQB|1|B5|A|3633
9QQB|1|B5|A|3634
*
9QQB|1|B5|U|4304
9QQB|1|B5|A|4305
9QQB|1|B5|C|4306
9QQB|1|B5|C|4307

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BB

Ribosomal protein L3

Chain BP

Large ribosomal subunit protein uL22