IL_9QQB_227

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CGG*CGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QQB_227 not in the Motif Atlas

Geometric match to IL_4KTG_001

Geometric discrepancy: 0.1648

The information below is about IL_4KTG_001

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

9QQB|1|B5|C|3861
9QQB|1|B5|G|3862
9QQB|1|B5|G|3863
*
9QQB|1|B5|C|3895
9QQB|1|B5|G|3896
9QQB|1|B5|G|3897

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BZ

60S ribosomal protein L27