IL_9QQL_016

3D structure

PDB id

9QQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPS15 P131 Mutant Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

GAAC*GAGUUCAAGAGGGC

Length

18 nucleotides

Bulged bases

9QQL|1|A2|G|409, 9QQL|1|A2|G|413

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQL|1|A2|G|387
9QQL|1|A2|A|388
9QQL|1|A2|A|389
9QQL|1|A2|C|390
*
9QQL|1|A2|G|401
9QQL|1|A2|A|402
9QQL|1|A2|G|403
9QQL|1|A2|U|404
9QQL|1|A2|U|405
9QQL|1|A2|C|406
9QQL|1|A2|A|407
9QQL|1|A2|A|408
9QQL|1|A2|G|409
9QQL|1|A2|A|410
9QQL|1|A2|G|411
9QQL|1|A2|G|412
9QQL|1|A2|G|413
9QQL|1|A2|C|414

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain C2

5.8S ribosomal RNA; 5.8S rRNA

Chain J2

Large ribosomal subunit protein uL22

Chain S2

Large ribosomal subunit protein uL24

Chain f2

Large ribosomal subunit protein eL39