IL_9QQL_053

3D structure

PDB id

9QQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPS15 P131 Mutant Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

(OMG)A(A2M)AG*CUAGUAGC

Length

13 nucleotides

Bulged bases

9QQL|1|A2|A|1463, 9QQL|1|A2|G|1467

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQL|1|A2|OMG|1335
9QQL|1|A2|A|1336
9QQL|1|A2|A2M|1337
9QQL|1|A2|A|1338
9QQL|1|A2|G|1339
*
9QQL|1|A2|C|1461
9QQL|1|A2|U|1462
9QQL|1|A2|A|1463
9QQL|1|A2|G|1464
9QQL|1|A2|U|1465
9QQL|1|A2|A|1466
9QQL|1|A2|G|1467
9QQL|1|A2|C|1468

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain F1

Large ribosomal subunit protein eL13

Chain F2

Large ribosomal subunit protein uL4

Chain H1

Large ribosomal subunit protein eL15

Chain U2

Large ribosomal subunit protein uL15

Chain d2

Large ribosomal subunit protein eL37