IL_9QQL_078

3D structure

PDB id

9QQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPS15 P131 Mutant Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

CUCAUCAG*CUGGAG

Length

14 nucleotides

Bulged bases

9QQL|1|A2|U|1732, 9QQL|1|A2|C|1733, 9QQL|1|A2|G|1857, 9QQL|1|A2|A|1859

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQL|1|A2|C|1728
9QQL|1|A2|U|1729
9QQL|1|A2|C|1730
9QQL|1|A2|A|1731
9QQL|1|A2|U|1732
9QQL|1|A2|C|1733
9QQL|1|A2|A|1734
9QQL|1|A2|G|1735
*
9QQL|1|A2|C|1855
9QQL|1|A2|U|1856
9QQL|1|A2|G|1857
9QQL|1|A2|G|1858
9QQL|1|A2|A|1859
9QQL|1|A2|G|1860

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain C1

Large ribosomal subunit protein uL6

Chain G1

Large ribosomal subunit protein eL14

Chain I2

Large ribosomal subunit protein uL13

Chain M2

Large ribosomal subunit protein eL20

Chain g2

Ubiquitin-ribosomal protein eL40 fusion protein