3D structure

PDB id
9QQL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mouse RPS15 P131 Mutant Ribosome POST translocation state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.09 Å

Loop

Sequence
UGGAAUG*CGAGAGA
Length
14 nucleotides
Bulged bases
9QQL|1|A2|U|2416, 9QQL|1|A2|A|2429
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QQL|1|A2|U|2411
9QQL|1|A2|G|2412
9QQL|1|A2|G|2413
9QQL|1|A2|A|2414
9QQL|1|A2|A|2415
9QQL|1|A2|U|2416
9QQL|1|A2|G|2417
*
9QQL|1|A2|C|2427
9QQL|1|A2|G|2428
9QQL|1|A2|A|2429
9QQL|1|A2|G|2430
9QQL|1|A2|A|2431
9QQL|1|A2|G|2432
9QQL|1|A2|A|2433

Current chains

Chain A2
28S ribosomal RNA

Nearby chains

Chain L2
Large ribosomal subunit protein eL19
Chain N3
Small ribosomal subunit protein uS15
Chain T2
Large ribosomal subunit protein eL27
Chain W2
Large ribosomal subunit protein eL30
Chain a2
Large ribosomal subunit protein eL34
Chain j2
Large ribosomal subunit protein eL43

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.0916 s