IL_9QQL_116

3D structure

PDB id

9QQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPS15 P131 Mutant Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

C(5MC)AA(A2M)UGCCUC(OMG)*(OMC)GCG

Length

16 nucleotides

Bulged bases

9QQL|1|A2|A2M|3441, 9QQL|1|A2|C|3447, 9QQL|1|A2|C|3466

QA status

Modified nucleotides: 5MC, A2M, OMG, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQL|1|A2|C|3437
9QQL|1|A2|5MC|3438
9QQL|1|A2|A|3439
9QQL|1|A2|A|3440
9QQL|1|A2|A2M|3441
9QQL|1|A2|U|3442
9QQL|1|A2|G|3443
9QQL|1|A2|C|3444
9QQL|1|A2|C|3445
9QQL|1|A2|U|3446
9QQL|1|A2|C|3447
9QQL|1|A2|OMG|3448
*
9QQL|1|A2|OMC|3464
9QQL|1|A2|G|3465
9QQL|1|A2|C|3466
9QQL|1|A2|G|3467

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain h2

60S ribosomal protein L41

Chain m2

Small subunit ribosomal RNA; SSU rRNA