IL_9QQL_142

3D structure

PDB id

9QQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPS15 P131 Mutant Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQL|1|A2|C|4118
9QQL|1|A2|A|4119
9QQL|1|A2|U|4120
9QQL|1|A2|U|4121
9QQL|1|A2|G|4122
*
9QQL|1|A2|C|4137
9QQL|1|A2|C|4138
9QQL|1|A2|A|4139
9QQL|1|A2|A|4140
9QQL|1|A2|G|4141
9QQL|1|A2|C|4142
9QQL|1|A2|G|4143

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain C1

Large ribosomal subunit protein uL6

Chain E2

Large ribosomal subunit protein uL3

Chain I2

Large ribosomal subunit protein uL13

Chain P2

Large ribosomal subunit protein uL14

Chain g2

Ubiquitin-ribosomal protein eL40 fusion protein