IL_9QQL_159

3D structure

PDB id

9QQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPS15 P131 Mutant Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

CCCCGGAUAG*UGCGGAGAG

Length

19 nucleotides

Bulged bases

9QQL|1|A2|C|4409, 9QQL|1|A2|C|4410, 9QQL|1|A2|A|4416, 9QQL|1|A2|G|4515, 9QQL|1|A2|C|4516, 9QQL|1|A2|G|4518, 9QQL|1|A2|A|4521

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQL|1|A2|C|4408
9QQL|1|A2|C|4409
9QQL|1|A2|C|4410
9QQL|1|A2|C|4411
9QQL|1|A2|G|4412
9QQL|1|A2|G|4413
9QQL|1|A2|A|4414
9QQL|1|A2|U|4415
9QQL|1|A2|A|4416
9QQL|1|A2|G|4417
*
9QQL|1|A2|U|4514
9QQL|1|A2|G|4515
9QQL|1|A2|C|4516
9QQL|1|A2|G|4517
9QQL|1|A2|G|4518
9QQL|1|A2|A|4519
9QQL|1|A2|G|4520
9QQL|1|A2|A|4521
9QQL|1|A2|G|4522

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain C1

Large ribosomal subunit protein uL6

Chain G1

Large ribosomal subunit protein eL14

Chain H2

Large ribosomal subunit protein eL6

Chain I2

Large ribosomal subunit protein uL13

Chain M2

Large ribosomal subunit protein eL20