3D structure

PDB id
9QQL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mouse RPS15 P131 Mutant Ribosome POST translocation state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.09 Å

Loop

Sequence
UAUCAA*UGACCACG
Length
14 nucleotides
Bulged bases
9QQL|1|m2|U|363, 9QQL|1|m2|C|401, 9QQL|1|m2|C|402
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QQL|1|m2|U|361
9QQL|1|m2|A|362
9QQL|1|m2|U|363
9QQL|1|m2|C|364
9QQL|1|m2|A|365
9QQL|1|m2|A|366
*
9QQL|1|m2|U|398
9QQL|1|m2|G|399
9QQL|1|m2|A|400
9QQL|1|m2|C|401
9QQL|1|m2|C|402
9QQL|1|m2|A|403
9QQL|1|m2|C|404
9QQL|1|m2|G|405

Current chains

Chain m2
18S ribosomal RNA

Nearby chains

Chain A2
Large subunit ribosomal RNA; LSU rRNA
Chain E3
Small ribosomal subunit protein uS12
Chain u2
Small ribosomal subunit protein eS8
Chain w2
Small ribosomal subunit protein uS17

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.0712 s