3D structure

PDB id
9QQL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mouse RPS15 P131 Mutant Ribosome POST translocation state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.09 Å

Loop

Sequence
GCUCAGCGUG*CCGUUGAACCC
Length
21 nucleotides
Bulged bases
9QQL|1|m2|U|1587, 9QQL|1|m2|G|1589
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QQL|1|m2|G|1543
9QQL|1|m2|C|1544
9QQL|1|m2|U|1545
9QQL|1|m2|C|1546
9QQL|1|m2|A|1547
9QQL|1|m2|G|1548
9QQL|1|m2|C|1549
9QQL|1|m2|G|1550
9QQL|1|m2|U|1551
9QQL|1|m2|G|1552
*
9QQL|1|m2|C|1584
9QQL|1|m2|C|1585
9QQL|1|m2|G|1586
9QQL|1|m2|U|1587
9QQL|1|m2|U|1588
9QQL|1|m2|G|1589
9QQL|1|m2|A|1590
9QQL|1|m2|A|1591
9QQL|1|m2|C|1592
9QQL|1|m2|C|1593
9QQL|1|m2|C|1594

Current chains

Chain m2
18S ribosomal RNA

Nearby chains

Chain B3
Small ribosomal subunit protein eS19
Chain C3
Small ribosomal subunit protein uS10
Chain H3
Small ribosomal subunit protein uS14
Chain R3
Small ribosomal subunit protein eS25
Chain q2
Small ribosomal subunit protein uS3
Chain s2
Small ribosomal subunit protein uS7
Chain y2
Small ribosomal subunit protein uS9

Coloring options:

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