IL_9QSA_021

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUUCAAC*GCGCACUU

Length

15 nucleotides

Bulged bases

9QSA|1|A2|C|692, 9QSA|1|A2|C|694

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|A2|A|466
9QSA|1|A2|U|467
9QSA|1|A2|U|468
9QSA|1|A2|C|469
9QSA|1|A2|A|470
9QSA|1|A2|A|471
9QSA|1|A2|C|472
*
9QSA|1|A2|G|689
9QSA|1|A2|C|690
9QSA|1|A2|G|691
9QSA|1|A2|C|692
9QSA|1|A2|A|693
9QSA|1|A2|C|694
9QSA|1|A2|U|695
9QSA|1|A2|U|696

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain H2

Large ribosomal subunit protein eL6

Chain k2

Large ribosomal subunit protein eL28