IL_9QSA_030

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9QSA|1|A2|G|755, 9QSA|1|A2|C|815

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|A2|G|752
9QSA|1|A2|A|753
9QSA|1|A2|A|754
9QSA|1|A2|G|755
9QSA|1|A2|G|756
9QSA|1|A2|U|757
9QSA|1|A2|G|758
9QSA|1|A2|G|759
*
9QSA|1|A2|U|810
9QSA|1|A2|G|811
9QSA|1|A2|U|812
9QSA|1|A2|U|813
9QSA|1|A2|A|814
9QSA|1|A2|C|815
9QSA|1|A2|A|816
9QSA|1|A2|G|817
9QSA|1|A2|C|818

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain G1

Large ribosomal subunit protein eL14

Chain M2

Large ribosomal subunit protein eL20