IL_9QSA_055

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCGGUAA*UAAAUGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|A2|C|1533
9QSA|1|A2|C|1534
9QSA|1|A2|G|1535
9QSA|1|A2|G|1536
9QSA|1|A2|U|1537
9QSA|1|A2|A|1538
9QSA|1|A2|A|1539
*
9QSA|1|A2|U|1594
9QSA|1|A2|A|1595
9QSA|1|A2|A|1596
9QSA|1|A2|A|1597
9QSA|1|A2|U|1598
9QSA|1|A2|G|1599
9QSA|1|A2|G|1600

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A1

Large ribosomal subunit protein uL30

Chain B2

5S ribosomal RNA; 5S rRNA

Chain D1

Large ribosomal subunit protein uL16

Chain N2

Large ribosomal subunit protein eL21