IL_9QSA_095

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGUAAC*GGAUAAG

Length

13 nucleotides

Bulged bases

9QSA|1|A2|U|2635

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|A2|C|2622
9QSA|1|A2|G|2623
9QSA|1|A2|U|2624
9QSA|1|A2|A|2625
9QSA|1|A2|A|2626
9QSA|1|A2|C|2627
*
9QSA|1|A2|G|2632
9QSA|1|A2|G|2633
9QSA|1|A2|A|2634
9QSA|1|A2|U|2635
9QSA|1|A2|A|2636
9QSA|1|A2|A|2637
9QSA|1|A2|G|2638

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain h2

60S ribosomal protein L41

Chain j2

Large ribosomal subunit protein eL43

Chain m2

Small subunit ribosomal RNA; SSU rRNA