IL_9QSA_133

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUCAGUAC*GGAACCG

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|A2|C|4248
9QSA|1|A2|U|4249
9QSA|1|A2|C|4250
9QSA|1|A2|A|4251
9QSA|1|A2|G|4252
9QSA|1|A2|U|4253
9QSA|1|A2|A|4254
9QSA|1|A2|C|4255
*
9QSA|1|A2|G|4260
9QSA|1|A2|G|4261
9QSA|1|A2|A|4262
9QSA|1|A2|A|4263
9QSA|1|A2|C|4264
9QSA|1|A2|C|4265
9QSA|1|A2|G|4266

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain C1

Large ribosomal subunit protein uL6

Chain E2

Large ribosomal subunit protein uL3

Chain P2

Large ribosomal subunit protein uL14

Chain g2

Ubiquitin-ribosomal protein eL40 fusion protein