IL_9QSA_164
3D structure
- PDB id
- 9QSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-1 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 9QSA|1|B2|U|84
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QSA_164 not in the Motif Atlas
- Geometric match to IL_8QYX_171
- Geometric discrepancy: 0.0803
- The information below is about IL_8QYX_171
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.6
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 241
Unit IDs
9QSA|1|B2|G|82
9QSA|1|B2|A|83
9QSA|1|B2|U|84
9QSA|1|B2|G|85
*
9QSA|1|B2|C|92
9QSA|1|B2|G|93
9QSA|1|B2|C|94
Current chains
- Chain B2
- 5S ribosomal RNA
Nearby chains
- Chain A1
- Large ribosomal subunit protein uL30
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain D1
- Large ribosomal subunit protein uL16
- Chain M2
- Large ribosomal subunit protein eL20
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