IL_9QSA_175

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUUAUGGU*AACGU(OMC)

Length

14 nucleotides

Bulged bases

9QSA|1|m2|G|113, 9QSA|1|m2|G|114

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|m2|G|108
9QSA|1|m2|U|109
9QSA|1|m2|U|110
9QSA|1|m2|A|111
9QSA|1|m2|U|112
9QSA|1|m2|G|113
9QSA|1|m2|G|114
9QSA|1|m2|U|115
*
9QSA|1|m2|A|350
9QSA|1|m2|A|351
9QSA|1|m2|C|352
9QSA|1|m2|G|353
9QSA|1|m2|U|354
9QSA|1|m2|OMC|355

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain r2

Small ribosomal subunit protein eS4

Chain u2

Small ribosomal subunit protein eS8

Chain w2

Small ribosomal subunit protein uS17