IL_9QSA_178

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUGACC*GGGAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|m2|C|188
9QSA|1|m2|U|189
9QSA|1|m2|G|190
9QSA|1|m2|A|191
9QSA|1|m2|C|192
9QSA|1|m2|C|193
*
9QSA|1|m2|G|208
9QSA|1|m2|G|209
9QSA|1|m2|G|210
9QSA|1|m2|A|211
9QSA|1|m2|U|212
9QSA|1|m2|G|213

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain u2

Small ribosomal subunit protein eS8