IL_9QSA_179

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAUU*ACCUCGGG

Length

12 nucleotides

Bulged bases

9QSA|1|m2|U|307, 9QSA|1|m2|G|309

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|m2|C|218
9QSA|1|m2|A|219
9QSA|1|m2|U|220
9QSA|1|m2|U|221
*
9QSA|1|m2|A|304
9QSA|1|m2|C|305
9QSA|1|m2|C|306
9QSA|1|m2|U|307
9QSA|1|m2|C|308
9QSA|1|m2|G|309
9QSA|1|m2|G|310
9QSA|1|m2|G|311

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain r2

Small ribosomal subunit protein eS4

Chain u2

Small ribosomal subunit protein eS8