IL_9QSA_184

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGG*CGAU(OMU)C

Length

9 nucleotides

Bulged bases

9QSA|1|m2|OMU|430

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|m2|G|413
9QSA|1|m2|G|414
9QSA|1|m2|G|415
*
9QSA|1|m2|C|426
9QSA|1|m2|G|427
9QSA|1|m2|A|428
9QSA|1|m2|U|429
9QSA|1|m2|OMU|430
9QSA|1|m2|C|431

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain E3

Small ribosomal subunit protein uS12

Chain L3

Small ribosomal subunit protein uS4

Chain r2

Small ribosomal subunit protein eS4