IL_9QSA_199

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGUAGU*AUCAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|m2|C|678
9QSA|1|m2|G|679
9QSA|1|m2|U|680
9QSA|1|m2|A|681
9QSA|1|m2|G|682
9QSA|1|m2|U|683
*
9QSA|1|m2|A|1026
9QSA|1|m2|U|1027
9QSA|1|m2|C|1028
9QSA|1|m2|A|1029
9QSA|1|m2|A|1030
9QSA|1|m2|G|1031

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain E3

Small ribosomal subunit protein uS12

Chain N3

Small ribosomal subunit protein uS15

Chain P3

Small ribosomal subunit protein uS8

Chain w2

Small ribosomal subunit protein uS17