IL_9QSA_209

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCUAG*CUUGGACC

Length

13 nucleotides

Bulged bases

9QSA|1|m2|G|972

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|m2|G|954
9QSA|1|m2|C|955
9QSA|1|m2|U|956
9QSA|1|m2|A|957
9QSA|1|m2|G|958
*
9QSA|1|m2|C|969
9QSA|1|m2|U|970
9QSA|1|m2|U|971
9QSA|1|m2|G|972
9QSA|1|m2|G|973
9QSA|1|m2|A|974
9QSA|1|m2|C|975
9QSA|1|m2|C|976

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain O3

Small ribosomal subunit protein uS11

Chain p2

40S ribosomal protein S3a