IL_9QSA_219

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

ACCA*UCCCU

Length

9 nucleotides

Bulged bases

9QSA|1|m2|C|1217, 9QSA|1|m2|C|1218

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|m2|A|1216
9QSA|1|m2|C|1217
9QSA|1|m2|C|1218
9QSA|1|m2|A|1219
*
9QSA|1|m2|U|1683
9QSA|1|m2|C|1684
9QSA|1|m2|C|1685
9QSA|1|m2|C|1686
9QSA|1|m2|U|1687

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain F3

Small ribosomal subunit protein eS26

Chain G3

Small ribosomal subunit protein eS28

Chain n2

Transfer RNA; tRNA

Chain s2

Small ribosomal subunit protein uS7

Chain y2

Small ribosomal subunit protein uS9