3D structure

PDB id
9R3A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain
Experimental method
ELECTRON MICROSCOPY
Resolution
2.86 Å

Loop

Sequence
UGCAU*AUG
Length
8 nucleotides
Bulged bases
9R3A|1|A|C|1028
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_9R3A_045 not in the Motif Atlas
Homologous match to IL_6CZR_154
Geometric discrepancy: 0.1809
The information below is about IL_6CZR_154
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_76319.4
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
4

Unit IDs

9R3A|1|A|U|1026
9R3A|1|A|G|1027
9R3A|1|A|C|1028
9R3A|1|A|A|1029
9R3A|1|A|U|1030
*
9R3A|1|A|A|1178
9R3A|1|A|U|1179
9R3A|1|A|G|1180

Current chains

Chain A
16S rRNA

Nearby chains

Chain C
Small ribosomal subunit protein uS3
Chain J
Small ribosomal subunit protein uS10
Chain N
Small ribosomal subunit protein uS14
Chain Y
Transfer RNA; tRNA

Coloring options:


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