IL_9R9O_049
3D structure
- PDB id
- 9R9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GACACCACAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 9R9O|1|C1|C|1196, 9R9O|1|C1|A|1302, 9R9O|1|C1|U|1305, 9R9O|1|C1|G|1306
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9R9O|1|C1|G|1194
9R9O|1|C1|A|1195
9R9O|1|C1|C|1196
9R9O|1|C1|A|1197
9R9O|1|C1|C|1198
9R9O|1|C1|C|1199
9R9O|1|C1|A|1200
9R9O|1|C1|C|1201
9R9O|1|C1|A|1202
9R9O|1|C1|A|1203
9R9O|1|C1|A|1204
9R9O|1|C1|A|1205
*
9R9O|1|C1|U|1299
9R9O|1|C1|G|1300
9R9O|1|C1|A|1301
9R9O|1|C1|A|1302
9R9O|1|C1|A|1303
9R9O|1|C1|A|1304
9R9O|1|C1|U|1305
9R9O|1|C1|G|1306
9R9O|1|C1|G|1307
9R9O|1|C1|A|1308
9R9O|1|C1|U|1309
9R9O|1|C1|G|1310
9R9O|1|C1|G|1311
9R9O|1|C1|C|1312
9R9O|1|C1|G|1313
9R9O|1|C1|C|1314
Current chains
- Chain C1
- 25S ribosomal RNA
Nearby chains
- Chain C4
- 5S ribosomal RNA; 5S rRNA
- Chain LB
- 60S ribosomal protein L3
- Chain LF
- 60S ribosomal protein L7-A
- Chain LI
- 60S ribosomal protein L10
- Chain LO
- 60S ribosomal protein L16-A
- Chain Lf
- 60S ribosomal protein L33-A
Coloring options: