IL_9R9O_061
3D structure
- PDB id
- 9R9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAUUCUUC*GGAAUAGUUUUC
- Length
- 21 nucleotides
- Bulged bases
- 9R9O|1|C1|U|1629, 9R9O|1|C1|U|1818, 9R9O|1|C1|U|1820, 9R9O|1|C1|U|1821
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9R9O|1|C1|G|1623
9R9O|1|C1|G|1624
9R9O|1|C1|A|1625
9R9O|1|C1|U|1626
9R9O|1|C1|U|1627
9R9O|1|C1|C|1628
9R9O|1|C1|U|1629
9R9O|1|C1|U|1630
9R9O|1|C1|C|1631
*
9R9O|1|C1|G|1811
9R9O|1|C1|G|1812
9R9O|1|C1|A|1813
9R9O|1|C1|A|1814
9R9O|1|C1|U|1815
9R9O|1|C1|A|1816
9R9O|1|C1|G|1817
9R9O|1|C1|U|1818
9R9O|1|C1|U|1819
9R9O|1|C1|U|1820
9R9O|1|C1|U|1821
9R9O|1|C1|C|1822
Current chains
- Chain C1
- 25S ribosomal RNA
Nearby chains
- Chain LZ
- 60S ribosomal protein L27-A
- Chain Lg
- 60S ribosomal protein L34-A
- Chain Lk
- 60S ribosomal protein L38
Coloring options: