IL_9R9O_067
3D structure
- PDB id
- 9R9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUAUCA*UCUUAUG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9R9O_067 not in the Motif Atlas
- Homologous match to IL_9PN5_070
- Geometric discrepancy: 0.2163
- The information below is about IL_9PN5_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70240.1
- Basepair signature
- cWW-L-R-tWH-L-R-L-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
9R9O|1|C1|U|1702
9R9O|1|C1|U|1703
9R9O|1|C1|A|1704
9R9O|1|C1|U|1705
9R9O|1|C1|C|1706
9R9O|1|C1|A|1707
*
9R9O|1|C1|U|1737
9R9O|1|C1|C|1738
9R9O|1|C1|U|1739
9R9O|1|C1|U|1740
9R9O|1|C1|A|1741
9R9O|1|C1|U|1742
9R9O|1|C1|G|1743
Current chains
- Chain C1
- 25S ribosomal RNA
Nearby chains
- Chain Lg
- 60S ribosomal protein L34-A
Coloring options: