IL_9R9O_091
3D structure
- PDB id
- 9R9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GG*CAC
- Length
- 5 nucleotides
- Bulged bases
- 9R9O|1|C1|A|2626
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9R9O_091 not in the Motif Atlas
- Homologous match to IL_9PN5_094
- Geometric discrepancy: 0.0816
- The information below is about IL_9PN5_094
- Detailed Annotation
- AG tHS outside loop
- Broad Annotation
- AG tHS outside loop
- Motif group
- IL_14190.5
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 188
Unit IDs
9R9O|1|C1|G|2614
9R9O|1|C1|G|2615
*
9R9O|1|C1|C|2625
9R9O|1|C1|A|2626
9R9O|1|C1|C|2627
Current chains
- Chain C1
- 25S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain LI
- 60S ribosomal protein L10
- Chain LT
- 60S ribosomal protein L21-A
- Chain Lb
- 60S ribosomal protein L29
- Chain Lo
- 60S ribosomal protein L42-A
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