IL_9R9O_166

3D structure

PDB id

9R9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAAAAAUU*AUAUUAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9R9O|1|C2|G|751
9R9O|1|C2|A|752
9R9O|1|C2|A|753
9R9O|1|C2|A|754
9R9O|1|C2|A|755
9R9O|1|C2|A|756
9R9O|1|C2|A|757
9R9O|1|C2|U|758
9R9O|1|C2|U|759
*
9R9O|1|C2|A|791
9R9O|1|C2|U|792
9R9O|1|C2|A|793
9R9O|1|C2|U|794
9R9O|1|C2|U|795
9R9O|1|C2|A|796
9R9O|1|C2|G|797
9R9O|1|C2|C|798

Current chains

Chain C2

18S ribosomal RNA

Nearby chains

Chain SE

40S ribosomal protein S4-A

Chain SJ

40S ribosomal protein S9-A

Chain SL

40S ribosomal protein S11-A

Chain SW

40S ribosomal protein S22-A