IL_9R9P_120
3D structure
- PDB id
- 9R9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUUG*CUUA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9R9P_120 not in the Motif Atlas
- Homologous match to IL_9PN5_125
- Geometric discrepancy: 0.1092
- The information below is about IL_9PN5_125
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71194.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 43
Unit IDs
9R9P|1|C1|U|3300
9R9P|1|C1|U|3301
9R9P|1|C1|U|3302
9R9P|1|C1|G|3303
*
9R9P|1|C1|C|3311
9R9P|1|C1|U|3312
9R9P|1|C1|U|3313
9R9P|1|C1|A|3314
Current chains
- Chain C1
- 25S ribosomal RNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain LP
- 60S ribosomal protein L17-A
- Chain Ld
- 60S ribosomal protein L31-A
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