IL_9R9P_138

3D structure

PDB id

9R9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

9R9P|1|C2|U|170

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9R9P|1|C2|G|143
9R9P|1|C2|U|144
9R9P|1|C2|A|145
9R9P|1|C2|U|146
9R9P|1|C2|A|147
9R9P|1|C2|A|148
9R9P|1|C2|C|149
*
9R9P|1|C2|G|165
9R9P|1|C2|C|166
9R9P|1|C2|U|167
9R9P|1|C2|A|168
9R9P|1|C2|A|169
9R9P|1|C2|U|170
9R9P|1|C2|A|171
9R9P|1|C2|C|172

Current chains

Chain C2

RNA (1642-MER)

Nearby chains

Chain SG

40S ribosomal protein S6-A

Chain SY

40S ribosomal protein S24-A