3D structure

PDB id
9RBF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a stalled E. coli 70S RNC-NuoK-86 in complex with the membrane protein insertase SecYEG-YidC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.44 Å

Loop

Sequence
CAG*CAGAAG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_9RBF_020 not in the Motif Atlas
Geometric match to IL_8B0X_020
Geometric discrepancy: 0.1961
The information below is about IL_8B0X_020
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_02111.1
Basepair signature
cWW-L-R-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

9RBF|1|A|C|440
9RBF|1|A|A|441
9RBF|1|A|G|442
*
9RBF|1|A|C|492
9RBF|1|A|A|493
9RBF|1|A|G|494
9RBF|1|A|A|495
9RBF|1|A|A|496
9RBF|1|A|G|497

Current chains

Chain A
16S rRNA

Nearby chains

Chain D
Small ribosomal subunit protein uS4

Coloring options:


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