IL_9RFW_039
3D structure
- PDB id
- 9RFW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Manikomycin bound to the Escherichia coli 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GGGAAAC*GGAAGAUGUAACGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 9RFW|1|a|A|1127, 9RFW|1|a|U|1130
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RFW|1|a|G|1024
9RFW|1|a|G|1025
9RFW|1|a|G|1026
9RFW|1|a|A|1027
9RFW|1|a|A|1028
9RFW|1|a|A|1029
9RFW|1|a|C|1030
*
9RFW|1|a|G|1124
9RFW|1|a|G|1125
9RFW|1|a|A|1126
9RFW|1|a|A|1127
9RFW|1|a|G|1128
9RFW|1|a|A|1129
9RFW|1|a|U|1130
9RFW|1|a|G|1131
9RFW|1|a|U|1132
9RFW|1|a|A|1133
9RFW|1|a|A|1134
9RFW|1|a|C|1135
9RFW|1|a|G|1136
9RFW|1|a|G|1137
9RFW|1|a|G|1138
9RFW|1|a|G|1139
9RFW|1|a|C|1140
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL36A
- Chain d
- Large ribosomal subunit protein uL3
- Chain i
- Large ribosomal subunit protein uL13
- Chain l
- Large ribosomal subunit protein uL16
Coloring options: