IL_9RFW_066

3D structure

PDB id

9RFW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Manikomycin bound to the Escherichia coli 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UAUGUAG*UGAAA

Length

12 nucleotides

Bulged bases

9RFW|1|a|U|1714

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RFW|1|a|U|1712
9RFW|1|a|A|1713
9RFW|1|a|U|1714
9RFW|1|a|G|1715
9RFW|1|a|U|1716
9RFW|1|a|A|1717
9RFW|1|a|G|1718
*
9RFW|1|a|U|1742
9RFW|1|a|G|1743
9RFW|1|a|A|1744
9RFW|1|a|A|1745
9RFW|1|a|A|1746

Current chains

Chain a

23S rRNA

Nearby chains