IL_9RFW_073

3D structure

PDB id

9RFW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Manikomycin bound to the Escherichia coli 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RFW|1|a|U|1851
9RFW|1|a|U|1852
9RFW|1|a|A|1853
9RFW|1|a|A|1854
9RFW|1|a|U|1855
9RFW|1|a|U|1856
9RFW|1|a|G|1857
9RFW|1|a|A|1858
9RFW|1|a|U|1859
9RFW|1|a|G|1860
*
9RFW|1|a|U|1882
9RFW|1|a|U|1883
9RFW|1|a|G|1884
9RFW|1|a|A|1885
9RFW|1|a|U|1886
9RFW|1|a|C|1887
9RFW|1|a|G|1888
9RFW|1|a|A|1889
9RFW|1|a|A|1890
9RFW|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains