3D structure

PDB id
9RG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In vitro reconstituted NAA40-NAC bound 80S
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
AUUCAAC*GCGCAUUU
Length
15 nucleotides
Bulged bases
9RG7|1|L5|U|467, 9RG7|1|L5|U|687
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RG7|1|L5|A|466
9RG7|1|L5|U|467
9RG7|1|L5|U|468
9RG7|1|L5|C|469
9RG7|1|L5|A|470
9RG7|1|L5|A|471
9RG7|1|L5|C|472
*
9RG7|1|L5|G|682
9RG7|1|L5|C|683
9RG7|1|L5|G|684
9RG7|1|L5|C|685
9RG7|1|L5|A|686
9RG7|1|L5|U|687
9RG7|1|L5|U|688
9RG7|1|L5|U|689

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LE
Large ribosomal subunit protein eL6
Chain Lr
60S ribosomal protein L28

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.148 s