IL_9RG7_200

3D structure

PDB id

9RG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In vitro reconstituted NAA40-NAC bound 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

UAUCAA*UGACCACG

Length

14 nucleotides

Bulged bases

9RG7|1|S2|U|361, 9RG7|1|S2|C|399, 9RG7|1|S2|C|400

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RG7|1|S2|U|359
9RG7|1|S2|A|360
9RG7|1|S2|U|361
9RG7|1|S2|C|362
9RG7|1|S2|A|363
9RG7|1|S2|A|364
*
9RG7|1|S2|U|396
9RG7|1|S2|G|397
9RG7|1|S2|A|398
9RG7|1|S2|C|399
9RG7|1|S2|C|400
9RG7|1|S2|A|401
9RG7|1|S2|C|402
9RG7|1|S2|G|403

Current chains

Chain S2

18S rRNA

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11

Chain SX

40S ribosomal protein S23