IL_9RHU_014

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CA(PSU)U*ACCUCGGG

Length

12 nucleotides

Bulged bases

9RHU|1|A1|U|306, 9RHU|1|A1|G|308

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|C|216
9RHU|1|A1|A|217
9RHU|1|A1|PSU|218
9RHU|1|A1|U|219
*
9RHU|1|A1|A|303
9RHU|1|A1|C|304
9RHU|1|A1|C|305
9RHU|1|A1|U|306
9RHU|1|A1|C|307
9RHU|1|A1|G|308
9RHU|1|A1|G|309
9RHU|1|A1|G|310

Current chains

Chain A1

18S rRNA

Nearby chains

Chain P1

40S ribosomal protein S4

Chain T1

40S ribosomal protein S8