IL_9RHU_028

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GAG*CGAGG(A2M)UC

Length

11 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|G|564
9RHU|1|A1|A|565
9RHU|1|A1|G|566
*
9RHU|1|A1|C|586
9RHU|1|A1|G|587
9RHU|1|A1|A|588
9RHU|1|A1|G|589
9RHU|1|A1|G|590
9RHU|1|A1|A2M|591
9RHU|1|A1|U|592
9RHU|1|A1|C|593

Current chains

Chain A1

18S rRNA

Nearby chains

Chain E1

40S ribosomal protein eS30

Chain U1

Small ribosomal subunit protein uS4