IL_9RHU_053

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CGAAG*CGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|C|1048
9RHU|1|A1|G|1049
9RHU|1|A1|A|1050
9RHU|1|A1|A|1051
9RHU|1|A1|G|1052
*
9RHU|1|A1|C|1068
9RHU|1|A1|G|1069
9RHU|1|A1|U|1070
9RHU|1|A1|A|1071
9RHU|1|A1|G|1072

Current chains

Chain A1

18S rRNA

Nearby chains

Chain A3

Large subunit ribosomal RNA; LSU rRNA

Chain D3

Large ribosomal subunit protein uL2

Chain F1

eS26

Chain Z1

Small ribosomal subunit protein uS11